PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_60274.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 840aa    MW: 91154.4 Da    PI: 6.5656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_60274.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.000696917291355
                   HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
           HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                   R+ i +++ eLre++P+ a     k  s  + Lek+v+++  Lq
  MLOC_60274.3 691 RQLIQDRIKELREMVPNgA-----KQCSIDALLEKTVKHMLFLQ 729
                   67799************66.....66888899******999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142154.2E-305160IPR025610Transcription factor MYC/MYB N-terminal
CDDcd000830.00303672729No hitNo description
PROSITE profilePS5088810.588678728IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.15E-5691734IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-5691741IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    Send to blast
MAVGEALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARATELG  60
CSAAVDSICS LVRKDMAEQV HVVGEGTIGR VAFTGTHQWI IHGTADDHGL SSEVASEMHY  120
QFRAGIKTIA IIPVLPRGVL QLGSTGVVME NTSFVMHAKK LCSQLNQRSS MAVSASVKST  180
SNQSRPLHGA SNIQAADSSF SQFPVIREQY RRADSATASS SKSLNASLFE AAQQNGLTAR  240
EHLVYSKPND MFVQQPSYCV SRLGSNTQSA AISSDLIPSS LASVEQQQML MNTIGQLEFG  300
SGTDLARSAL LKSLLYRNPF MHDTSDMKLS HGRVGLSHGT AGHGSYGFLP GSAGVVSTTL  360
CTSSQVSEQG SHSSSGMLRQ KQPPVSCNVP QSSEFTMKMV RQEGRSSEGA LPVSSQSDVQ  420
ISNCLNGISQ ENLLSRSGHM HKDQNTNRAN DPHVAVSTQG VKNMDACMLP GMPGETAHSL  480
LLQPTWDNDL FDIFGSEFHQ LGHNVDANLV SSCDAKSHSL DRDATEPSIC LDSSSLFSSL  540
DNDFPCSGIF SLTNTDQLLD AVISNVNPSS KQSSDDNASC KTALTDIPNI CHFGLEELKQ  600
CDSSGIPSTV IKNESAQIVK QPYYFDKTED GCHSQNNGAQ KSQIRLWIEN GQNMKCESAS  660
ASNSKGLDAP SKSNRKRSRP GESSKARPKD RQLIQDRIKE LREMVPNGAK QCSIDALLEK  720
TVKHMLFLQS VTKHADKLKD STESKILGSE NGPVWKDYFE GGATWAFDVG SQSMTCPIIV  780
EDLDRPRQML VEMICEDRGI FLEIADFIKG LGLTILRGVM EARKSKIWAR FTVEYRQTGT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3695000.0AK369500.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2092I05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616921.10.0PREDICTED: transcription factor LHW
TrEMBLM0XI720.0M0XI72_HORVD; Uncharacterized protein
STRINGMLOC_60274.10.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.18e-48conserved peptide upstream open reading frame 7